| District | City | School Name | Management Organization | Accolades | Year Opened |
| Mullinville | 21St Century Elementary School Learning Academy | Did Not Make AYP | 2005 | ||
| Mullinville | 21St Century High School Learning Academy | Did Not Make AYP | 2003 | ||
| Mcpherson Unified School District 418 | Mcpherson | Career Academy of Mcpherson County | 2007 | ||
| Galena | Cornerstone Alternative Charter High School | 1998 | |||
| Kaw Valley USD 321 | Delia | Delia Charter School | Made AYP | 2003 | |
| Erie CUSD 101 | Erie | Erie High School | Made AYP | 2007 | |
| El Dorado Public Schools | El Dorado | EXTEND High School | 2008 | ||
| Erie CUSD 101 | Galesburg | Galesburg Elementary | Made AYP | 2003 | |
| Greeley County Schools | Tribune | Greeley County Jr. High Charter School | Made AYP | 2006 | |
| Topeka Public Schools | Topeka | Hope Street Academy Charter Middle School | Did Not Make AYP | 2001 | |
| Topeka Public Schools | Topeka | Hope Street Charter Academy | Did Not Make AYP | 2004 | |
| USD 258 Public Schools | Humboldt | Humboldt Elementary Charter School | Made AYP | 2008 | |
| Olathe | Insight Schools of Kansas at Hilltop Education Center | Insight Schools | 2008 | ||
| Little River | Kansas Career and Technical Virtual School | 2008 | |||
| Kinsley-Offerle Public Schools | Kinsley | Kinsley-Offerle Jr./Sr. High Charter School | Made AYP | 2007 | |
| Lawrence | Lawrence Virtual School | Made AYP | 2004 | ||
| Haysville | Learning By Design Charter School | 2007 | |||
| Kansas City, Kansas Public Schools | Kansas City | Maurice R. Holman Academy of Excellence | Made AYP | 2008 | |
| Mulvane School District | Mulvane | Mulvane Academy | 2004 | ||
| Parsons District Schools | Parsons | Parsons Health Careers Academy | 2007 | ||
| Hutchinson | Pleasantview Academy Grade School | Did Not Make AYP | 2005 | ||
| Hutchinson | Pleasantview High School Charter | Did Not Make AYP | 2001 | ||
| Elkhart USD 218 | Elkhart | Point Rock Family Academy | 2004 | ||
| Oswego Schools | Oswego | Service Valley Charter Academy | Made AYP | 2008 | |
| Lindsborg | Smoky Valley Virtual Charter School | 2005 | |||
| Renwick School District | Colwich | St. Mark's Charter School | Made AYP | 2007 | |
| Stafford Schools USD 349 | Stafford | Stafford Middle School/High School | Made AYP | 2005 | |
| Sterling USD 376 | Sterling | Sterling Academy | Made AYP | 2006 | |
| Colby | Thomas County Academy | Made AYP | 2005 | ||
| Emporia | Turning Point Learning Center | Made AYP | 2005 | ||
| Ulysses Unified School District 214 | Ulyssess | Ulysses Career Learning Academy | 2008 | ||
| Pratt Unified School District 382 | Pratt | Walden Center | Did Not Make AYP | 2007 | |
| Newton Public Schools | Walton | Walton Rural Life Center | Made AYP | 2007 | |
| West Franklin USD 287 | Pomona | West Franklin High School Learning Center | 2001 | ||
| Haven Public Schools | Yoder | Yoder Charter Elementary School | Made AYP | 1998 |